BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A09LP1|AL429152
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig700 1646 0.0
>3x_Contig700
Length = 2125
Score = 1646 bits (829), Expect = 0.0
Identities = 849/857 (99%)
Strand = Plus / Minus
Query: 1 actcttgctgccgtctctgcttcgatggctgccattcggcaattctcatctggaaggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 actcttgctgccgtctctgcttcgatggctgccattcggcaattctcatctggaaggatt 1249
Query: 61 gaaccaccttgaatttttcaacattaaaatattacacaaggaaagttcatcatagtagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 gaaccaccttgaatttttcaacattaaaatattacacaaggaaagttcatcatagtagat 1189
Query: 121 atatcgtatagttgattgttatagcacctatttgtttcagtacattcagaaagcgtaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 atatcgtatagttgattgttatagcacctatttgtttcagtacattcagaaagcgtaact 1129
Query: 181 caacagagatcaaatcagtcacaatgggtatgtgaacaagatttaaaatataccgtggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 caacagagatcaaatcagtcacaatgggtatgtgaacaagatttaaaatataccgtggag 1069
Query: 241 attgtcagtggtttattcgatttttggtatcctgagggaagaatggaacgtttgaagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 attgtcagtggtttattcgatttttggtatcctgagggaagaatggaacgtttgaagttt 1009
Query: 301 agtaccaagtgaacatgaaatgagccatggttatttaacagaatacagcatttcagagtg 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1008 agtaccaagtgaacatgaaatgagctatggttatttaacagaatacagcatttcagagtg 949
Query: 361 aatcaatgagaaaacaccaaccgtattggaaattcagatattgcatcgacaaggggggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 aatcaatgagaaaacaccaaccgtattggaaattcagatattgcatcgacaaggggggag 889
Query: 421 agttcatttgagttggtgaactatatcaaaagatcagtattttggtcgaagtatggacga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 agttcatttgagttggtgaactatatcaaaagatcagtattttggtcgaagtatggacga 829
Query: 481 ttcactagcataaaaccctgttcacgctggaggaagttatttgggttatttgttgtccct 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 828 ttcactagcataaaaccctgttcacgctggaggaagtaatttgggttatttgttgtccct 769
Query: 541 atgtttcttaattcggtgtagtcgagacaacctcagagaattgtatatcagtgaagtcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 atgtttcttaattcggtgtagtcgagacaacctcagagaattgtatatcagtgaagtcaa 709
Query: 601 cgctacactgactgaacataattaacaggaactcagtcgtattaaacaactggggttcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cgctacactgactgaacataattaacaggaactcagtcgtattaaacaactggggttcag 649
Query: 661 atagcctggacctccctatacaataagaagaagagaatagaattcctgcaatcaaaataa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 atagcctggacctccctatacaataagaagaagagaatagaattcctgcaatcaaaataa 589
Query: 721 gctggatgaagcwaaagaatatttttttactaacatcgacatgtatcactatcttatgat 780
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gctggatgaagctaaagaatatttttttactaacatcgacatgtatcactatcttatgat 529
Query: 781 atgttaatttctaacagttaacgttccaaagaccagaaagacttactgttagggtwaggg 840
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 528 atgttaatttctaacagttaacgttccaaagaccagaaagacttactgtaagggtaagga 469
Query: 841 gtgccgttagcccgccc 857
||||||| ||| |||||
Sbjct: 468 gtgccgtaagcacgccc 452
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6311
Number of Sequences: 1807
Number of extensions: 6311
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)